项目编号 PRJCA002326
项目标题 Transcriptome of patients infected with SARS-CoV-2
涉及领域 Medical
数据类型 Transcriptome or Gene expression
Raw sequence reads
物种名称 Homo sapiens
描述信息 RNA-seq was employed to investigate host responses to SARS-CoV-2 infection in the bronchoalveolar lavage fluid (BALF) and peripheral blood mononuclear cells (PBMC) samples of COVID-19 patients.
样品范围 Multiisolate
发布日期 2020-04-01
出版信息
PubMed ID 文章标题 杂志名称 Doi 发表年份
32228226 Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients Emerging Microbes & Infections 10.1080/22221751.2020.1747363 2020
33918313 A COVID-19 Drug Repurposing Strategy through Quantitative Homological Similarities Using a Topological Data Analysis-Based Framework Pharmaceutics 10.3390/pharmaceutics13040488 2021
33782412 Comprehensive transcriptomic analysis of COVID-19 blood, lung, and airway Scientific Reports 10.1038/s41598-021-86002-x 2021
34200572 Identification of Lung and Blood Microbiota Implicated in COVID-19 Prognosis Cells 10.3390/cells10061452 2021
33602138 SARS-CoV-2 early infection signature identified potential key infection mechanisms and drug targets BMC Genomics 10.1186/s12864-021-07433-4 2021
34366686 Integrated multi-omics approach identified molecular mechanism and pathogenetic processes of COVID-19 that affect patient with Parkinson's disorder Saudi Journal of Biological Sciences 10.1016/j.sjbs.2021.07.074 2021
32945352 Transcriptomic analysis of COVID‑19 lungs and bronchoalveolar lavage fluid samples reveals predominant B cell activation responses to infection International Journal of Molecular Medicine 10.3892/ijmm.2020.4702 2020
32736569 A modular framework for the development of targeted Covid-19 blood transcript profiling panels Journal of Translational Medicine 10.1186/s12967-020-02456-z 2020
33521209 Immune characteristics analysis reveals two key inflammatory factors correlated to the expressions of SARS-CoV-2 S1-specific antibodies Genes & Diseases 10.1016/j.gendis.2020.12.007 2022
33279954 A review of COVID-19 biomarkers and drug targets: resources and tools Briefings in Bioinformatics 10.1093/bib/bbaa328 2020
35972201 Impaired activation of transposable elements in SARS‐CoV ‐2 infection Reviewer Report EMBO Reports 10.15252/embr.202255101 2022
38646531 Identification and characterization of endogenous retroviruses upon SARS-CoV-2 infection Frontiers in Immunology 10.3389/fimmu.2024.1294020 2024
33178176 Differential Expression of Viral Transcripts From Single-Cell RNA Sequencing of Moderate and Severe COVID-19 Patients and Its Implications for Case Severity Frontiers in Microbiology 10.3389/fmicb.2020.603509 2020
35983322 Identification of Novel Therapeutic Candidates Against SARS-CoV-2 Infections: An Application of RNA Sequencing Toward mRNA Based Nanotherapeutics Frontiers in Microbiology 10.3389/fmicb.2022.901848 2022
37019895 A comprehensive analysis of gene expression profiling data in COVID-19 patients for discovery of specific and differential blood biomarker signatures Scientific Reports 10.1038/s41598-023-32268-2 2023
38811528 Natural evidence of coronaviral 2′-O-methyltransferase activity affecting viral pathogenesis via improved substrate RNA binding Signal Transduction and Targeted Therapy 10.1038/s41392-024-01860-x 2024
36085307 Peroxisomal very long-chain fatty acid transport is targeted by herpesviruses and the antiviral host response Communications Biology 10.1038/s42003-022-03867-y 2022
36506181 Unveiling the Biomarkers of Cancer and COVID-19 and Their Regulations in Different Organs by Integrating RNA-Seq Expression and Protein–Protein Interactions ACS Omega 10.1021/acsomega.2c04389 2022
36951513 Multiscale network analysis identifies potential receptors for SARS‐CoV ‐2 and reveals their tissue‐specific and age‐dependent expression Febs Letters 10.1002/1873-3468.14613 2023
35411293 The active lung microbiota landscape of COVID-19 patients through the metatranscriptome data analysis BioImpacts 10.34172/bi.2021.23378 2021
数据提供者
数据提供者 数据提供者的网站链接
Yu Chen http://klv.whu.edu.cn/
Ke Lan http://klv.whu.edu.cn/
实验材料提供者 Yong Xiong
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
Wuhan University Special Fund for COVID-19 Research N/A
Ministry of Science and Technology of the People's Republic of China (MOST) National Science and Technology Major Project 2018ZX10733403
提交者 Yu Zhou (yu.zhou@whu.edu.cn)
提交单位 Wuhan University
提交日期 2020-03-04

项目包含数据信息

资源名称 描述
BioSample (10)  show -
GSA (1) -
CRA002390 Transcriptome of patients infected with SARS-CoV-2